I have no idea how often it will be used by others and probably is not essential to many but if it can be added without extra cost or a lot of work I would love to see it. I use the trigger output quite a bit at work to trigger a scope. It is a great way of catching glitches, noise, and other anomalies on datelines or other parts of the circuit that can not be seen with a LA. I use clock_in but I don't think I have ever used clock_out so that is not as important to me, I would love to hear from others on this. Some of the hobbyist USB LA's have clock_in, clock_out, and trigger_out like the USBee.
Jack, I like your solution and thanks for adding these two outputs